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Hall, J., 1871. On Fossil Trees from Gilboa, Schoharie County, New York. Transactions of the Albany Institute 129-131.
Hall, J., 1873. Reply to a Note on a Question of Priority. New York State Museum Annual Report 23, 248-252.
Hall, J., 1888. Report of Geologist. New York State Museum Annual Report 41, 359-410.
Hall, J., 1878. Genus Plumalina. New York State Museum Annual Report 30, 255-256.
Hall, J., 1859. Contributions to the Palaeontology of New York. Annual Report of the Regents of the University, on the Condition of the State Cabinet of Natural History 12, 7-96.
Hall, J., 1883. Bryozoans of the Upper Helderberg and Hamilton Groups. Transactions of the Albany Institute 10, 145-197.
Hall, J., 1892. Report of Geologist. New York State Museum Annual Report 45, 321-616.
Hall, J., Clarke, J.M., 1898. A Memoir on the Paleozoic Reticulate Sponges Constituting the Family Dictyospongidae, New York State Museum Memoir. The University of the State of New York, Albany, New York.
Hall, J., 1859. New American Trilobites [from Hudson River group of Vermont]. Canadian Journal of Natural Sciences 4, 491-493.
Hall, J., 1839. Third Annual Report of the Fourth Geological District of the State of New York. New York Geological Survey, Annual Report 3, 287-339.
Hall, J., 1870. Descriptions of New Species of Fossils, from the Devonian Rocks of Iowa. Annual Report of the Regents of the University, on the Condition of the State Cabinet of Natural History 23, 223-243.
Hall, J., 1849. On the Supposed Impression in Shale of the Soft Parts of Orthoceras. Quarterly Journal of the Geological Society of London 107-111.

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