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Hall, J., 1849. List of Minerals, Geological Specimens and Fossils added 1847 and 1848. Annual Report of the Regents of the University, on the Condition of the State Cabinet of Natural History, with Catalogue of the Same 2, 65-70.
Hall, J., Clarke, J.M., 1894. Introduction to the Study of the Brachiopoda, pt 2,. New York State Museum Annual Report 47, 943-1137.
Hall, J., 1879. Notice of Some Remarkable Crinoidal Forms from the Lower Helderberg Group. Annual Report of the New York State Museum 28, 205-210.
Hall, J., 1859. Supplementary Note on the Genus Ambonychia. Annual Report of the Regents of the University, on the Condition of the State Cabinet of Natural History 12, 110.
Hall, J., 1838. Second Annual Report of the Fourth Geological District of New York. New York Geological Survey, Annual Report 2, 287-374.
Hall, J., 1886. Obscure Organisms in Roofing Slates of Washington County, N. Y.. New York State Museum Annual Report 39, 160.
Hall, J., 1851. Lower Silurian System; Upper Silurian and Devonian Series, in: Foster, J.W., Whitney, J.D. (Eds.), Report On The Geology Of The Lake Superior Land District; Part 2. pp. 140-166.
Hall, J., 1862. Contributions to Palaeontology; Comprising Descriptions of New Species of Fossils from the Helderberg, Hamilton and Chemung Groups. Annual Report of the Regents of the University, on the Condition of the State Cabinet of Natural History 15, 27-197.
Hall, J., 1843. Geology of the Region of Niagara Falls. Proceedings of the Boston Society of Natural History 1, 52.
Hall, J., 1844. Trenton Falls. The Northern Light 4, 33-36.
Hall, J., 1889. Description of Linnarssonia cf. pretiosa Billings. Proceedings and Transactions of the Royal Society of Canada 7, 55.
Hall, J., 1857. On the Genus Tellinomya and Allied Genera. Annual Report of the Regents of the University, on the Condition of the State Cabinet of Natural History 10, 181-186.
Hall, J., 1865. On the Graptolites of the Quebec Group. Canadian Naturalist and Geologist 2, 42-53.
Hall, J., 1868. New or Little Known Species of Fossils from Rocks of the Age of the Niagara Group. Annual Report of the Regents of the University, on the Condition of the State Cabinet of Natural History 20 rev., 347-438.
Hall, J., 1848. Catalogue of Specimens in the Paleontological Department of the Geological Survey. Annual Report of the Regents of the University, on the Condition of the State Cabinet of Natural History, with Catalogue of the Same 1, 15p.
Hall, J., 1879. New Species of Fossils from the Trenton Limestone. New York State Museum Annual Report 28, 93-97.

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