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Report of Geologist. New York State Museum Annual Report 41, 359-410., 1888.
Reply to a Note on a Question of Priority. New York State Museum Annual Report 23, 248-252., 1873.
Notes on Some Fossils of the So-called Taconic System Described by Doctor Emmons. American Journal of Science 19, 434-345., 1855.
On the Geological Relations of the Mastodon and Fossil Elephant of North America. The American Naturalist 1, 500., 1867.
Paleontology of New York Vol. 1: Organic Remains of the Lower Division of the New York System.. New York State Geological Survey, Albany, New York., 1847.
Report of Geologist. New York State Museum Annual Report 45, 321-616., 1892.
Genus Plumalina. New York State Museum Annual Report 30, 255-256., 1878.
Contributions to the Palaeontology of New York. Annual Report of the Regents of the University, on the Condition of the State Cabinet of Natural History 12, 7-96., 1859.
Bryozoans of the Upper Helderberg and Hamilton Groups. Transactions of the Albany Institute 10, 145-197., 1883.
Paleontology of New York Vol. 5, Part I: Lamellibranchiata (I) Monomyaria of Upper Helderberg, Hamilton, Portage, and Chemung Groups.. New York State Geological Survey, Albany, New York., 1884.
Descriptions of New Species of Fossils, from the Devonian Rocks of Iowa. Annual Report of the Regents of the University, on the Condition of the State Cabinet of Natural History 23, 223-243., 1870.
On the Supposed Impression in Shale of the Soft Parts of Orthoceras. Quarterly Journal of the Geological Society of London 107-111., 1849.
A Memoir on the Paleozoic Reticulate Sponges Constituting the Family Dictyospongidae, New York State Museum Memoir. The University of the State of New York, Albany, New York., 1898.
New American Trilobites [from Hudson River group of Vermont]. Canadian Journal of Natural Sciences 4, 491-493., 1859.
Third Annual Report of the Fourth Geological District of the State of New York. New York Geological Survey, Annual Report 3, 287-339., 1839.
On the Potsdam sandstone and Hudson River rocks in Vermont. American Journal of Science 33, 106-108., 1862.
The Crinoidea of the Rocks of New York, Their Geological and Geographical Distribution. American Journal of Science and Arts 45, 349-351., 1843.
Report on Building Stones. New York State Museum Annual Report 39, 186-225., 1886.
On the Relations of the Middle and Upper Silurian (Clinton, Niagara, and Lower Helderberg) Rocks of the United States. Geological Magazine 9, 509-513., 1872.