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Clarke, J.M., 1889. The Genus Bronteus in the Chemung Rocks of New York. New York State Museum Annual Report 42, 403-405.
Clarke, J.M., 1889. Genera of the Paleozoic Brachiopoda. New York State Museum Annual Report 42, 389-393.
Clarke, J.M., 1892. Genera or the Palaeozoic Brachiopoda. New York State Museum Annual Report 44, 45-48.
Clarke, J.M., 1892. Genus Acidaspis. New York State Museum Annual Report 44, 91-101.
Clarke, J.M., 1892. Coronura aspectans. New York State Museum Annual Report 44, 105-109.
Clarke, J.M., 1892. Terataspis grandis. New York State Museum Annual Report 44, 111-114.
Clarke, J.M., 1892. Observations on the Terataspisgrandis, Hall, the Largest Known Trilobite. New York State Museum Annual Report 44, 111-114.
Clarke, J.M., 1892. On Cordania, a Proposerd New Genus of Trilobites. New York State Museum Annual Report 45, 440-443.
Clarke, J.M., 1894. Succession of the Fossil Faunas in the Section of the Levonia Salt Shaft. New York State Museum Annual Report 47, 325-352.
Clarke, J.M., 1894. New or Rare Species of Fossils from the Horizons of the Livonian Salt Shaft. New York State Museum Annual Report 47, 353-383.
Clarke, J.M., 1894. Report on Field -work in Chenango County. New York State Museum Annual Report 47, 723-751.

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